STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2476KEGG: hypothetical protein. (390 aa)    
Predicted Functional Partners:
Snas_2475
PFAM: VanZ family protein.
 
     0.730
Snas_2477
PFAM: regulatory protein TetR; KEGG: bcn:Bcen_5773 TetR family transcriptional regulator.
       0.558
Snas_0929
KEGG: scl:sce6646 hypothetical protein.
  
     0.518
Snas_3334
KEGG: sde:Sde_0034 hypothetical protein.
  
     0.468
Snas_0937
Hypothetical protein; KEGG: geo:Geob_2464 beta-propeller repeat TECPR.
  
     0.465
Snas_2581
PFAM: protein of unknown function DUF418; protein of unknown function DUF405; KEGG: scl:sce6113 hypothetical protein.
  
     0.439
Snas_1670
PFAM: protein of unknown function DUF405; KEGG: scl:sce6113 hypothetical protein.
  
     0.433
Snas_2152
PFAM: protein of unknown function DUF418; protein of unknown function DUF405; KEGG: scl:sce6113 hypothetical protein.
  
     0.420
Snas_4741
PFAM: protein of unknown function DUF418; protein of unknown function DUF405; KEGG: scl:sce6113 hypothetical protein.
  
     0.419
Snas_2478
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eta:ETA_34060 putative hydrolase.
       0.412
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.