STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2626PFAM: glycoside hydrolase family 16; KEGG: mxa:MXAN_6550 glycosy hydrolase family protein. (283 aa)    
Predicted Functional Partners:
Snas_2627
KEGG: hypothetical protein.
     
 0.770
Snas_5561
PFAM: glycoside hydrolase family 3 domain protein; KEGG: Os03g0749300; hypothetical protein.
  
 0.618
Snas_2625
PFAM: glycoside hydrolase family 3 domain protein; KEGG: scl:sce6897 hypothetical protein; Belongs to the glycosyl hydrolase 3 family.
  
 0.557
pdxT
SNO glutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.
       0.500
Snas_2629
PFAM: protein of unknown function DUF28; KEGG: gme:Gmet_0743 hypothetical protein.
       0.500
Snas_6330
Cellulase; PFAM: glycoside hydrolase family 6; KEGG: mxa:MXAN_4837 endoglucanase; Belongs to the glycosyl hydrolase family 6.
 
   
 0.489
Snas_1803
Hypothetical protein; KEGG: cja:CJA_2657 carbohydrate binding protein, putative, cbp32B.
  
     0.471
Snas_3362
Glucan endo-1,6-beta-glucosidase; PFAM: glycoside hydrolase family 30; KEGG: rfr:Rfer_1106 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.471
Snas_3248
PFAM: glycoside hydrolase family 3 domain protein; KEGG: vei:Veis_0942 glycoside hydrolase family 3 protein; Belongs to the glycosyl hydrolase 3 family.
  
 0.430
Snas_5017
PFAM: glycoside hydrolase family 30; KEGG: cak:Caul_2067 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.426
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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