STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_2769PFAM: major facilitator superfamily MFS_1; KEGG: eum:ECUMN_4826 conserved hypothetical protein mrx. (417 aa)    
Predicted Functional Partners:
Snas_2770
PFAM: Rieske [2Fe-2S] domain protein; KEGG: bbr:BB1104 [2Fe-2S] protein.
       0.773
Snas_5851
PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: rme:Rmet_5002 major facilitator superfamily MFS_1.
  
     0.762
Snas_1226
PFAM: major facilitator superfamily MFS_1; KEGG: pag:PLES_24031 putative major facilitator superfamily (MFS) transporter.
  
     0.755
Snas_4679
PFAM: major facilitator superfamily MFS_1; KEGG: scl:sce4550 major facilitator superfamily permease.
  
     0.688
Snas_3213
PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_0950 hypothetical protein.
  
     0.641
Snas_2768
PFAM: regulatory protein TetR; KEGG: mxa:MXAN_1727 TetR family transcriptional regulator.
       0.576
Snas_2767
PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: hypothetical protein.
       0.417
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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