STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_5159KEGG: swd:Swoo_1068 superoxide dismutase, Ni; TIGRFAM: superoxide dismutase, Ni; PFAM: Superoxide dismutase Ni-type. (138 aa)    
Predicted Functional Partners:
Snas_5160
Hypothetical protein.
 
     0.765
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.578
Snas_5310
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
     
 0.578
Snas_3148
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.519
Snas_5158
Malate dehydrogenase (oxaloacetate- decarboxylating); PFAM: malic protein NAD-binding; malic protein domain protein; UBA/THIF-type NAD/FAD binding protein; KEGG: tau:Tola_0213 malate dehydrogenase (oxaloacetate-decarboxylating).
       0.469
Snas_5769
PFAM: alpha/beta hydrolase fold; KEGG: mlo:mlr7232 hypothetical protein.
  
   
 0.429
Snas_0440
PFAM: ABC transporter related; X-Pro dipeptidyl- peptidase domain protein; alpha/beta hydrolase fold; peptidase S15; SMART: AAA ATPase; KEGG: mxa:MXAN_5584 ABC transporter, ATP-binding protein.
  
     0.419
Snas_5708
PFAM: ferric-uptake regulator; KEGG: mxa:MXAN_3702 FUR family transcriptional regulator; Belongs to the Fur family.
  
     0.419
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.