STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_5665TIGRFAM: phosphoenolpyruvate phosphomutase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: dal:Dalk_1323 phosphoenolpyruvate phosphomutase. (437 aa)    
Predicted Functional Partners:
Snas_5664
TIGRFAM: phosphonopyruvate decarboxylase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: azo:azo2699 phosphonopyruvate decarboxylase, putative.
  
 0.998
Snas_5663
PFAM: iron-containing alcohol dehydrogenase; KEGG: mno:Mnod_1464 iron-containing alcohol dehydrogenase.
   
 0.830
Snas_1016
PFAM: Citrate synthase; KEGG: mlo:mll3842 citrate synthase 2; Belongs to the citrate synthase family.
  
 
 0.682
Snas_3093
PFAM: Citrate synthase; KEGG: atu:Atu5306 citrate synthase 2; Belongs to the citrate synthase family.
  
 
 0.682
Snas_5666
KEGG: aha:AHA_2671 hypothetical protein.
  
  
 0.655
Snas_0745
PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; glycosyl transferase family 2; KEGG: ppr:PBPRA2712 teichoic acid biosynthesis protein F.
  
  
 0.552
Snas_5667
Hypothetical protein.
  
  
 0.547
Snas_5355
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bmj:BMULJ_00680 D-lactate dehydrogenase.
 
 
 0.518
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
     
 0.514
Snas_2378
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sfu:Sfum_1404 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 
 0.473
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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