STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppanPeter Pan-like protein; Belongs to the PPAN family (426 aa)    
Predicted Functional Partners:
DDB0190846
annotation not available
   
   0.998
DDB0186705
annotation not available
   
 
 0.992
DDB0188412
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
   
 
 0.989
DDB0304570
WD repeat-containing protein DDB_G0290555
   
 0.989
rrs1
Ribosome biogenesis regulatory protein homolog; Involved in ribosomal large subunit assembly
   
  0.989
surf6
Surfeit locus protein 6 homolog; Involved in a nucleolar function
   
 
 0.988
fsjC
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits
   
 
  0.982
imp4
annotation not available
   
 
 0.981
bxdc2
Ribosome biogenesis protein BRX1 homolog; Required for biogenesis of the 60S ribosomal subunit
   
 
 0.976
mak16l
Protein MAK16 homolog
   
  0.971
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: ATCC 11735, D. discoideum, Dictyostelium discoideum, IMI 69094
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