STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab1ARas-related protein Rab-1A. (202 aa)    
Predicted Functional Partners:
DDB0189731
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.888
trappc1-1
Trafficking protein particle complex subunit 1; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.678
trappc3
Trafficking protein particle complex subunit 3; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.678
trappc4
Trafficking protein particle complex subunit 4; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.674
trappc5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.672
DDB0204612
Uncharacterized protein.
   
 0.671
trappc2
Trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.670
syn5
t-SNARE family protein.
    
 0.624
DDB0202550
Uso1_p115_head domain-containing protein.
   
 0.618
DDB_G0269942
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.616
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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