STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB_G0275419Uncharacterized protein. (540 aa)    
Predicted Functional Partners:
DDB0190551
Nudix hydrolase domain-containing protein.
 
      0.870
DDB_G0275673
Uncharacterized protein.
   
 
 0.735
DDB0188832
MRP-L46 domain-containing protein.
   
   0.708
Mrpl3
Uncharacterized protein.
   
   0.701
mrpl16
60S ribosomal protein L16, mitochondrial.
   
   0.658
DDB0188436
Uncharacterized protein.
   
   0.655
DDB0185424
Uncharacterized protein.
   
 
 0.654
mrpl22
Probable 39S ribosomal protein L22, mitochondrial.
   
 
 0.652
Mrpl15
Ribosomal_L18e/L15P domain-containing protein.
   
   0.643
DDB0217569
Uncharacterized protein.
   
 
 0.642
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.