STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB0168059SEC7 domain-containing protein. (2048 aa)    
Predicted Functional Partners:
arrL
ADP-ribosylation factor L; May be involved in trafficking events within the endosomal system.
    
 
 0.825
DDB0186819
J domain-containing protein.
   
  
 0.714
DDB0219603
SEC7 domain-containing protein.
   
  
0.538
DDB0183825
PlsC domain-containing protein.
    
   0.480
DDB0219551
SEC7 domain-containing protein.
  
   
0.440
DDB_G0292332
ADP-ribosylation factor-like protein DDB_G0292332; Binds and exchanges GTP and GDP.
   
 
 0.407
arrB
ADP-ribosylation factor-related.
   
 
 0.407
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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