STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB0189332Uncharacterized protein. (488 aa)    
Predicted Functional Partners:
DDB0188667
Cellulase domain-containing protein.
   
 
 0.751
DDB0204945
Aamy domain-containing protein.
   
 
 0.750
DDB0186806
Aamy domain-containing protein.
   
 
 0.741
amyA
Putative alpha-amylase.
   
 
 0.741
Gtr2
Uncharacterized protein.
   
 
 0.741
DDB0216403
Heat shock factor (HSF)-type DNA-binding domain-containing protein.
   
 
 0.578
DDB0187404
AA_permease domain-containing protein.
  
 
 0.565
DDB0219215
Uncharacterized protein.
  
 
 0.545
bcaA
Branched-chain-amino-acid aminotransferase; Catalyzes the first reaction in the catabolism of the essential branched chain amino acids leucine, isoleucine, and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.534
DDB0219216
Uncharacterized protein.
  
 
 0.521
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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