STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce3073Putative membrane-associated protein. (567 aa)    
Predicted Functional Partners:
sce3074
Putative secreted protein.
       0.752
sce0936
Hypothetical protein; Predicted phosphatase.
  
     0.722
sce5244
PE_PGRS family protein; Family membership.
  
     0.688
sce4674
Protein kinase; Family membership.
  
     0.683
sce5133
Protein kinase; Family membership.
  
     0.673
sce6003
Protein kinase; Family membership.
  
     0.671
sce1617
Protein kinase; Family membership.
  
     0.667
sce3632
Protein kinase; Family membership.
  
     0.666
sce8650
Protein kinase; Family membership.
  
     0.664
chlG
Putative Octaprenyltransferase; Family membership.
  
     0.663
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.