STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce3497Protein kinase; Family membership. (2031 aa)    
Predicted Functional Partners:
sce3507
Two-component hybrid sensor and regulator; Family membership.
  
 
 0.853
sce6826
Two-component hybrid sensor and regulator; Family membership.
  
 
 0.853
sce7217
Unnamed protein product; Family membership.
  
 
 0.764
sce8495
Unnamed protein product; Family membership.
  
 
 0.736
sce5107
Two-component hybrid sensor and regulator; Family membership.
  
 
 0.730
sce8125
Two-component hybrid histidine kinase; Family membership.
  
 
 0.713
sce0713
Two-component hybrid sensor and regulator.
  
 
 0.710
sce3063
Two-component hybrid sensor and regulator; Family membership.
  
 
 0.706
sce2315
Hypothetical protein predicted by Glimmer/Critica.
  
     0.704
sce2655
Two-component hybrid sensor and regulator; Family membership.
  
 
 0.668
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.