STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cga2Glucan 1,4-alpha-glucosidase; High confidence in function and specificity. (792 aa)    
Predicted Functional Partners:
treS
Trehalose synthase; High confidence in function and specificity.
    
 0.926
cga1
Glucan 1,4-alpha-glucosidase; High confidence in function and specificity.
  
  
 
0.923
sce3449
Alpha-glucosidase family protein; Family membership; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.913
glgP
Phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.911
sce3064
Alpha amylase, catalytic region; Family membership.
    
 0.910
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.908
sce1626
Hypothetical protein; Belongs to the glycosyl hydrolase 57 family.
    
  0.904
sce0351
4-alpha-glucanotransferase homolog; Family membership.
    
  0.903
sce1303
Glycogen operon protein; Family membership; Belongs to the glycosyl hydrolase 13 family.
    
 0.903
malQ2
4-alpha-glucanotransferase; High confidence in function and specificity.
    
  0.903
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.