Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
hcaT | sce4232 | sce7408 | sce4232 | Permease of the major facilitator superfamily,probable 3-phenylpropionate transporter. | Predicted phosphatase/putative hydrolase; Function unclear. | 0.639 |
hcaT | sce5510 | sce7408 | sce5510 | Permease of the major facilitator superfamily,probable 3-phenylpropionate transporter. | Predicted hydrolase (HAD superfamily). | 0.639 |
sce4232 | hcaT | sce4232 | sce7408 | Predicted phosphatase/putative hydrolase; Function unclear. | Permease of the major facilitator superfamily,probable 3-phenylpropionate transporter. | 0.639 |
sce4232 | sce5510 | sce4232 | sce5510 | Predicted phosphatase/putative hydrolase; Function unclear. | Predicted hydrolase (HAD superfamily). | 0.573 |
sce4232 | sce8121 | sce4232 | sce8121 | Predicted phosphatase/putative hydrolase; Function unclear. | Put. Trehalose/maltose hydrolase; Family membership. | 0.459 |
sce4232 | sce8858 | sce4232 | sce8858 | Predicted phosphatase/putative hydrolase; Function unclear. | Putative phosphatase; Function unclear. | 0.514 |
sce4232 | sce8898 | sce4232 | sce8898 | Predicted phosphatase/putative hydrolase; Function unclear. | Predicted phosphoglycolate phosphatase; Specificity unclear. | 0.431 |
sce5509 | sce5510 | sce5509 | sce5510 | Hypothetical protein predicted by Glimmer/Critica. | Predicted hydrolase (HAD superfamily). | 0.467 |
sce5510 | hcaT | sce5510 | sce7408 | Predicted hydrolase (HAD superfamily). | Permease of the major facilitator superfamily,probable 3-phenylpropionate transporter. | 0.639 |
sce5510 | sce4232 | sce5510 | sce4232 | Predicted hydrolase (HAD superfamily). | Predicted phosphatase/putative hydrolase; Function unclear. | 0.573 |
sce5510 | sce5509 | sce5510 | sce5509 | Predicted hydrolase (HAD superfamily). | Hypothetical protein predicted by Glimmer/Critica. | 0.467 |
sce5510 | sce7778 | sce5510 | sce7778 | Predicted hydrolase (HAD superfamily). | Maltose/maltodextrin transport permease homologue; Family membership. | 0.465 |
sce5510 | sce8121 | sce5510 | sce8121 | Predicted hydrolase (HAD superfamily). | Put. Trehalose/maltose hydrolase; Family membership. | 0.469 |
sce5510 | sce8858 | sce5510 | sce8858 | Predicted hydrolase (HAD superfamily). | Putative phosphatase; Function unclear. | 0.778 |
sce5510 | sce8898 | sce5510 | sce8898 | Predicted hydrolase (HAD superfamily). | Predicted phosphoglycolate phosphatase; Specificity unclear. | 0.467 |
sce7778 | sce5510 | sce7778 | sce5510 | Maltose/maltodextrin transport permease homologue; Family membership. | Predicted hydrolase (HAD superfamily). | 0.465 |
sce7778 | sce8121 | sce7778 | sce8121 | Maltose/maltodextrin transport permease homologue; Family membership. | Put. Trehalose/maltose hydrolase; Family membership. | 0.907 |
sce7778 | sce8858 | sce7778 | sce8858 | Maltose/maltodextrin transport permease homologue; Family membership. | Putative phosphatase; Function unclear. | 0.454 |
sce8121 | sce4232 | sce8121 | sce4232 | Put. Trehalose/maltose hydrolase; Family membership. | Predicted phosphatase/putative hydrolase; Function unclear. | 0.459 |
sce8121 | sce5510 | sce8121 | sce5510 | Put. Trehalose/maltose hydrolase; Family membership. | Predicted hydrolase (HAD superfamily). | 0.469 |
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