STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadBenoyl-CoA hydratase; Family membership; Belongs to the enoyl-CoA hydratase/isomerase family. (251 aa)    
Predicted Functional Partners:
sce7905
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); Unnamed protein product; Family membership; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.830
sce0251
Unnamed protein product; Family membership.
 
 0.820
rimK1
Ribosomal protein S6 modification protein; High confidence in function and specificity; Belongs to the RimK family.
       0.791
sce6904
Hypothetical protein.
       0.757
sce3180
Probable enoyl-CoA hydratase/isomerase; Family membership.
  
     0.725
sce7807
Histidine kinase; Unnamed protein product; Family membership.
    
 
 0.718
sce3507
Two-component hybrid sensor and regulator; Family membership.
    
 
 0.717
sce6826
Two-component hybrid sensor and regulator; Family membership.
    
 
 0.717
sce0713
Two-component hybrid sensor and regulator.
    
 
 0.712
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
  
     0.711
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.