STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepMPhosphoenolpyruvate mutase; High confidence in function and specificity. (554 aa)    
Predicted Functional Partners:
sce7307
TPP_enzyme_C domain-containing protein; Unnamed protein product; Family membership.
  
 0.967
comD
ComD protein; Family membership.
 
   
 0.963
sce7308
Sugar nucleotidyltransferase; Family membership.
 
   
0.848
sce1736
Citrate synthase (EC 2.3.3.1).
 
 
 0.822
cis1
Citrate synthase; Family membership; Belongs to the citrate synthase family.
 
 
 0.791
cis2
Citrate synthase; High confidence in function and specificity; Belongs to the citrate synthase family.
  
 
 0.791
phnW
2-aminoethylphosphonate:pyruvate aminotransferase; Family membership.
 
  
 0.763
acs
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.643
aceB
Malate synthase; High confidence in function and specificity; Belongs to the malate synthase family.
   
  
 0.638
sce0442
Serine-pyruvate aminotransferase; Family membership.
  
  
 0.584
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.