Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cbhA | geoA | sce8077 | sce8552 | Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6. | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | 0.749 |
| cbhA | sce0998 | sce8077 | sce0998 | Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6. | Hypothetical protein predicted by Glimmer/Critica. | 0.772 |
| cbhA | sce2175 | sce8077 | sce2175 | Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6. | PE_PGRS family protein. | 0.771 |
| cbhA | sce2212 | sce8077 | sce2212 | Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6. | Putative topoisomerase; Family membership. | 0.771 |
| cbhA | sce3277 | sce8077 | sce3277 | Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6. | Putative Esterase; Esterase with broad substrate specificity, that may be involved in degradation of plant biomass present in the habitat of S.cellulosum. In vitro, displays acetyl esterase activity, aryl esterase activity, paraben esterase activity, carboxyl esterase activity, poly-3-hydroxybutyric acid (PHB) depolymerase activity, and a low feruloyl esterase activity. Does not possess any paraoxonase activity. Is able to bind to multiple substrate molecules simultaneously. | 0.775 |
| cbhA | sce4184 | sce8077 | sce4184 | Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6. | Hypothetical protein predicted by Glimmer/Critica. | 0.774 |
| cbhA | sce4411 | sce8077 | sce4411 | Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6. | Putative secreted protein. | 0.708 |
| cbhA | sce5436 | sce8077 | sce5436 | Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6. | Hypothetical protein predicted by Glimmer/Critica. | 0.772 |
| cbhA | sce6739 | sce8077 | sce6739 | Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6. | Putative lipase; Family membership. | 0.775 |
| cbhA | sce9313 | sce8077 | sce9313 | Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6. | Hypothetical protein predicted by Glimmer/Critica. | 0.764 |
| geoA | cbhA | sce8552 | sce8077 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Cellulose 1,4-beta-cellobiosidase; High confidence in function and specificity; Belongs to the glycosyl hydrolase family 6. | 0.749 |
| geoA | sce0998 | sce8552 | sce0998 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Hypothetical protein predicted by Glimmer/Critica. | 0.677 |
| geoA | sce2175 | sce8552 | sce2175 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | PE_PGRS family protein. | 0.676 |
| geoA | sce2212 | sce8552 | sce2212 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Putative topoisomerase; Family membership. | 0.659 |
| geoA | sce3277 | sce8552 | sce3277 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Putative Esterase; Esterase with broad substrate specificity, that may be involved in degradation of plant biomass present in the habitat of S.cellulosum. In vitro, displays acetyl esterase activity, aryl esterase activity, paraben esterase activity, carboxyl esterase activity, poly-3-hydroxybutyric acid (PHB) depolymerase activity, and a low feruloyl esterase activity. Does not possess any paraoxonase activity. Is able to bind to multiple substrate molecules simultaneously. | 0.753 |
| geoA | sce4184 | sce8552 | sce4184 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Hypothetical protein predicted by Glimmer/Critica. | 0.752 |
| geoA | sce4411 | sce8552 | sce4411 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Putative secreted protein. | 0.731 |
| geoA | sce5436 | sce8552 | sce5436 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Hypothetical protein predicted by Glimmer/Critica. | 0.687 |
| geoA | sce6739 | sce8552 | sce6739 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Putative lipase; Family membership. | 0.747 |
| geoA | sce9313 | sce8552 | sce9313 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Hypothetical protein predicted by Glimmer/Critica. | 0.697 |
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