STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce8796Two-component response regulator; Family membership. (203 aa)    
Predicted Functional Partners:
sce0777
CheA-like hybrid histidine kinase; Family membership.
  
 
 0.701
sce8797
Sensor histidine kinase; Family membership.
 
 
   0.694
sce8798
Sensor histidine kinase; Family membership.
 
     0.643
sce4190
Uncharacterized protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.535
sce4309
Hybrid sensory histidine kinase; Family membership.
 
 
 0.513
dctD
Response regulator; Family membership.
      
0.511
sce0932
Two-component sensor histidine kinase; Family membership.
 
     0.485
cheA2
Chemotaxis protein CheA.
 
 
 0.462
sce4025
Two-component sensor histidine kinase; Family membership.
 
     0.455
sce1730
Hypothetical protein; Family membership.
  
 
 0.454
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.