STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_09212Solanesyl-diphosphate synthase 1, mitochondrial; Belongs to the FPP/GGPP synthase family. (380 aa)    
Predicted Functional Partners:
BWQ96_00211
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.905
BWQ96_03281
Putative 26S proteasome non-ATPase regulatory subunit 3.
 
      0.899
BWQ96_00441
Geranylgeranyl diphosphate reductase, chloroplastic.
  
 0.898
BWQ96_01445
Isopentenyl-diphosphate Delta-isomerase 1.
  
 
 0.886
BWQ96_08100
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.869
BWQ96_03594
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
 
 
 0.849
BWQ96_08764
Squalene synthase.
  
 0.845
BWQ96_03389
All-trans-phytoene synthase.
  
 0.845
BWQ96_00481
4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
   
 0.845
BWQ96_10115
Indole-3-glycerol phosphate synthase.
    
  0.833
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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