STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_08941Sodium/potassium-transporting ATPase subunit alpha; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1168 aa)    
Predicted Functional Partners:
BWQ96_04867
ALA-interacting subunit 5; Belongs to the CDC50/LEM3 family.
    
 0.487
BWQ96_02098
ALA-interacting subunit 5; Belongs to the CDC50/LEM3 family.
    
 0.487
BWQ96_05483
Glycerophosphodiester phosphodiesterase GDE1.
  
 0.463
BWQ96_08630
Ferredoxin--NADP reductase, cyanelle.
    
 0.451
BWQ96_05855
Methionine synthase reductase.
    
 0.451
BWQ96_05286
NADPH oxidoreductase A.
    
 0.451
BWQ96_03199
Nitric oxide synthase.
    
 0.451
BWQ96_01764
NADPH-dependent diflavin oxidoreductase 1.
    
 0.451
BWQ96_07093
V-type proton ATPase catalytic subunit A.
    
 0.446
BWQ96_08182
Putative magnesium transporter YhiD.
  
 
 0.418
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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