STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_05424COP9 signalosome complex subunit 1. (450 aa)    
Predicted Functional Partners:
BWQ96_03514
COP9 signalosome complex subunit 3.
   
 0.999
BWQ96_09147
COP9 signalosome complex subunit 8.
   
 0.998
BWQ96_08377
COP9 signalosome complex subunit 4.
   
 0.998
BWQ96_02515
COP9 signalosome complex subunit 2.
   
 0.998
BWQ96_02155
COP9 signalosome complex subunit 6a.
   
 0.998
BWQ96_00281
COP9 signalosome complex subunit 5.
   
 0.998
BWQ96_10127
Ubiquitin-like domain-containing protein.
    
 0.959
BWQ96_07292
E3 ubiquitin-protein ligase RBX1.
   
 0.941
BWQ96_03807
Cullin-4; Belongs to the cullin family.
    
 0.921
BWQ96_07864
COP9 signalosome complex subunit 7.
   
 0.917
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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