STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_05110Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2. (214 aa)    
Predicted Functional Partners:
BWQ96_04045
Very-long-chain enoyl-CoA reductase.
   
 0.983
BWQ96_09990
Very-long-chain 3-oxoacyl-CoA reductase.
   
 0.892
BWQ96_00381
Very-long-chain 3-oxoacyl-CoA reductase.
   
 0.892
BWQ96_03879
Acyl-CoA desaturase.
     
 0.857
BWQ96_05509
Elongation of fatty acids protein.
    
 0.844
BWQ96_02189
Delta(12) fatty acid desaturase.
    
 0.838
BWQ96_04896
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2.
  
  
 
0.831
BWQ96_04499
Testosterone 17-beta-dehydrogenase 3.
   
 0.716
BWQ96_04021
Inactive hydroxysteroid dehydrogenase-like protein 1.
   
 0.716
BWQ96_01509
Putative short-chain type dehydrogenase/reductase y4eK.
   
 0.716
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.