STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_03644Transcription initiation factor TFIID subunit 6. (369 aa)    
Predicted Functional Partners:
BWQ96_09361
Transcription initiation factor TFIID subunit 11.
    
 0.970
BWQ96_09054
Transcription initiation factor TFIID subunit 7.
    
 0.970
BWQ96_07781
Transcription initiation factor TFIID subunit 12.
   
 0.970
BWQ96_01180
Transcription initiation factor TFIID subunit 2.
    
 0.970
BWQ96_04214
Transcription initiation factor TFIID subunit 1.
    
 0.967
BWQ96_01958
Transcription initiation factor TFIID subunit 8.
    
 0.965
BWQ96_02847
Transcription initiation factor TFIID subunit 9.
  
 
 0.963
BWQ96_03504
Transcription initiation factor TFIID subunit 13.
    
 0.955
BWQ96_03069
Transcription initiation factor TFIID subunit 10.
    
 0.955
BWQ96_05346
TATA-box-binding protein.
   
 0.953
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.