STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_00863Putative oxidoreductase YrbE. (366 aa)    
Predicted Functional Partners:
BWQ96_01657
Bifunctional phosphatase IMPL2, chloroplastic.
    
 0.858
BWQ96_00957
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
    
  0.850
BWQ96_03540
Inositol-1-monophosphatase.
    
 0.828
BWQ96_03474
Inositol-1-monophosphatase.
    
 0.828
BWQ96_02469
Putative oxidoreductase YrbE.
  
  
 
0.827
BWQ96_05483
Glycerophosphodiester phosphodiesterase GDE1.
   
  0.648
BWQ96_02826
Nicotinamide-nucleotide adenylyltransferase.
   
 
 0.610
BWQ96_05645
Aspartate-semialdehyde dehydrogenase.
   
 
  0.510
BWQ96_08768
Aldose 1-epimerase.
  
 
 0.479
BWQ96_00151
Cell division control protein 42-like.
    
  0.461
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.