STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_0132650S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (283 aa)    
Predicted Functional Partners:
BWQ96_10111
50S ribosomal protein L13.
  
 0.997
BWQ96_09832
50S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.
  
 0.997
BWQ96_05339
30S ribosomal protein S16-1, chloroplastic.
   
 
 0.997
BWQ96_04060
50S ribosomal protein L19.
  
 
 0.997
BWQ96_03673
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.997
BWQ96_02084
39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
  
 0.997
BWQ96_01253
50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 0.997
BWQ96_01196
30S ribosomal protein S6.
   
 0.997
BWQ96_01579
54S ribosomal protein L24, mitochondrial.
  
 
 0.997
BWQ96_01175
50S ribosomal protein L21.
   
 
 0.997
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.