STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_004814-hydroxy-3-methylbut-2-enyl diphosphate reductase. (407 aa)    
Predicted Functional Partners:
BWQ96_02739
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase.
  
 0.963
BWQ96_08451
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (Ferredoxin).
  
  
 0.934
BWQ96_03749
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.925
BWQ96_00012
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.889
BWQ96_00211
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
   
 0.881
BWQ96_09441
Geranylgeranyl pyrophosphate synthase, chloroplastic; Belongs to the FPP/GGPP synthase family.
   
 0.872
BWQ96_01445
Isopentenyl-diphosphate Delta-isomerase 1.
     
 0.857
BWQ96_09212
Solanesyl-diphosphate synthase 1, mitochondrial; Belongs to the FPP/GGPP synthase family.
   
 0.845
BWQ96_05532
Trifunctional purine biosynthetic protein adenosine-3.
  
 
 0.831
BWQ96_09445
Uncharacterized protein.
  
 
 0.830
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.