STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_00100Multidrug resistance-associated protein 1. (1373 aa)    
Predicted Functional Partners:
BWQ96_06826
Multidrug resistance-associated protein 1.
  
  
 
0.835
BWQ96_01954
Protein lap1.
   
 0.721
BWQ96_03546
Ubiquitin carboxyl-terminal hydrolase.
    
  0.594
BWQ96_08859
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.581
BWQ96_03799
RING finger protein 5.
    
 0.560
BWQ96_09549
ABC transporter G family member 22.
    
 0.554
BWQ96_08437
ABC transporter G family member 22.
    
0.554
BWQ96_06674
ABC transporter G family member 27.
    
0.554
BWQ96_06297
ABC transporter G family member 11.
    
0.554
BWQ96_03559
ABC transporter G family member 7.
    
0.554
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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