STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2141968Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
C2G38_2254644
Uncharacterized protein.
    
 0.989
C2G38_1392992
Uncharacterized protein.
  
 
0.984
C2G38_1975328
Autophagy-related protein.
   
 0.977
C2G38_1988266
Ubiquitin and ribosomal protein S27a-like protein.
    
 0.904
C2G38_903477
Ubiquitin-like domain-containing protein.
   
 0.876
C2G38_2024102
Ubiquitin-related domain-containing protein.
   
 0.876
C2G38_262870
Ubiquitin family-domain-containing protein.
   
 0.876
C2G38_2017275
Ubiquitin-related domain-containing protein.
   
 0.876
C2G38_2166091
Ubiquitin-like domain-containing protein.
   
 0.876
C2G38_2155647
Ubiquitin-related domain-containing protein.
   
 0.876
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.