STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2032249PITH domain-containing protein. (422 aa)    
Predicted Functional Partners:
C2G38_1877775
26S proteasome non-ATPase regulatory subunit 14.
   
 
 0.816
C2G38_1987904
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
   
 
 0.731
C2G38_1960902
Uncharacterized protein.
   
 
 0.689
C2G38_1967352
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
   
   0.687
C2G38_2134623
T-complex protein 1 subunit beta.
   
  0.607
C2G38_2091700
PCI domain-containing protein.
   
 
 0.590
C2G38_2114975
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
  0.586
C2G38_16865
26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.
   
   0.585
C2G38_2243367
PCI domain-containing protein.
   
 
 0.573
C2G38_2253032
Maintenance of mitochondrial structure and function-domain-containing protein.
   
   0.569
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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