STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1950537Cyclin-like protein. (308 aa)    
Predicted Functional Partners:
C2G38_2131086
TATA-box binding protein.
   
 0.983
C2G38_1987303
Transcription initiation factor IIF, beta subunit-domain-containing protein.
    
 0.981
C2G38_2132659
RNA polymerase Rpb7.
   
 0.981
C2G38_2147543
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.980
C2G38_2251141
DNA-directed RNA polymerase.
    
 0.980
C2G38_1960022
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.980
C2G38_2125139
DNA directed RNA polymerase.
   
 0.979
C2G38_620615
Uncharacterized protein.
    
 0.979
C2G38_1991036
RNA polymerase I.
    
 0.977
C2G38_2166517
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
   
 0.970
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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