Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MAE_06805 | MAE_39090 | MAE_06805 | MAE_39090 | Hypothetical protein. | Penicillin-binding protein. | 0.693 |
MAE_07870 | MAE_39090 | MAE_07870 | MAE_39090 | Putative carboxypeptidase. | Penicillin-binding protein. | 0.903 |
MAE_13410 | MAE_39090 | MAE_13410 | MAE_39090 | Probable peptidase. | Penicillin-binding protein. | 0.699 |
MAE_21260 | MAE_39090 | MAE_21260 | MAE_39090 | Penicillin-binding protein. | Penicillin-binding protein. | 0.724 |
MAE_21260 | ftsW | MAE_21260 | MAE_16870 | Penicillin-binding protein. | Cell division protein; Belongs to the SEDS family. | 0.980 |
MAE_21260 | mraY | MAE_21260 | MAE_00970 | Penicillin-binding protein. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.450 |
MAE_21260 | murC | MAE_21260 | MAE_25040 | Penicillin-binding protein. | UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.683 |
MAE_21260 | murG | MAE_21260 | MAE_21740 | Penicillin-binding protein. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.489 |
MAE_21260 | rodA | MAE_21260 | MAE_24140 | Penicillin-binding protein. | Rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.977 |
MAE_39090 | MAE_06805 | MAE_39090 | MAE_06805 | Penicillin-binding protein. | Hypothetical protein. | 0.693 |
MAE_39090 | MAE_07870 | MAE_39090 | MAE_07870 | Penicillin-binding protein. | Putative carboxypeptidase. | 0.903 |
MAE_39090 | MAE_13410 | MAE_39090 | MAE_13410 | Penicillin-binding protein. | Probable peptidase. | 0.699 |
MAE_39090 | MAE_21260 | MAE_39090 | MAE_21260 | Penicillin-binding protein. | Penicillin-binding protein. | 0.724 |
MAE_39090 | MAE_45050 | MAE_39090 | MAE_45050 | Penicillin-binding protein. | Putative peptidase. | 0.630 |
MAE_39090 | ftsW | MAE_39090 | MAE_16870 | Penicillin-binding protein. | Cell division protein; Belongs to the SEDS family. | 0.689 |
MAE_39090 | mraY | MAE_39090 | MAE_00970 | Penicillin-binding protein. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.626 |
MAE_39090 | murC | MAE_39090 | MAE_25040 | Penicillin-binding protein. | UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.695 |
MAE_39090 | murG | MAE_39090 | MAE_21740 | Penicillin-binding protein. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.656 |
MAE_39090 | rodA | MAE_39090 | MAE_24140 | Penicillin-binding protein. | Rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.697 |
MAE_45050 | MAE_39090 | MAE_45050 | MAE_39090 | Putative peptidase. | Penicillin-binding protein. | 0.630 |
page 1 of 3