Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHZ_c1634 | PHZ_c2000 | PHZ_c1634 | PHZ_c2000 | Succinate-semialdehyde dehydrogenase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.929 |
PHZ_c1634 | gabD | PHZ_c1634 | PHZ_c1999 | Succinate-semialdehyde dehydrogenase. | Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.919 |
PHZ_c1678 | PHZ_c1995 | PHZ_c1678 | PHZ_c1995 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Methylmalonate-semialdehyde dehydrogenase. | 0.943 |
PHZ_c1678 | PHZ_c2000 | PHZ_c1678 | PHZ_c2000 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.900 |
PHZ_c1678 | PHZ_c2117 | PHZ_c1678 | PHZ_c2117 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.916 |
PHZ_c1678 | PHZ_c2846 | PHZ_c1678 | PHZ_c2846 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Aldehyde dehydrogenase. | 0.916 |
PHZ_c1678 | PHZ_c3046 | PHZ_c1678 | PHZ_c3046 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.916 |
PHZ_c1678 | mmsA1 | PHZ_c1678 | PHZ_c0206 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Methylmalonate-semialdehyde dehydrogenase. | 0.943 |
PHZ_c1995 | PHZ_c1678 | PHZ_c1995 | PHZ_c1678 | Methylmalonate-semialdehyde dehydrogenase. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.943 |
PHZ_c1995 | PHZ_c2000 | PHZ_c1995 | PHZ_c2000 | Methylmalonate-semialdehyde dehydrogenase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.979 |
PHZ_c1995 | PHZ_c2117 | PHZ_c1995 | PHZ_c2117 | Methylmalonate-semialdehyde dehydrogenase. | NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.900 |
PHZ_c1995 | PHZ_c2846 | PHZ_c1995 | PHZ_c2846 | Methylmalonate-semialdehyde dehydrogenase. | Aldehyde dehydrogenase. | 0.922 |
PHZ_c1995 | PHZ_c3046 | PHZ_c1995 | PHZ_c3046 | Methylmalonate-semialdehyde dehydrogenase. | NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.900 |
PHZ_c1995 | gabD | PHZ_c1995 | PHZ_c1999 | Methylmalonate-semialdehyde dehydrogenase. | Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.777 |
PHZ_c1995 | mmsA1 | PHZ_c1995 | PHZ_c0206 | Methylmalonate-semialdehyde dehydrogenase. | Methylmalonate-semialdehyde dehydrogenase. | 0.900 |
PHZ_c2000 | PHZ_c1634 | PHZ_c2000 | PHZ_c1634 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Succinate-semialdehyde dehydrogenase. | 0.929 |
PHZ_c2000 | PHZ_c1678 | PHZ_c2000 | PHZ_c1678 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.900 |
PHZ_c2000 | PHZ_c1995 | PHZ_c2000 | PHZ_c1995 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Methylmalonate-semialdehyde dehydrogenase. | 0.979 |
PHZ_c2000 | PHZ_c2117 | PHZ_c2000 | PHZ_c2117 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.929 |
PHZ_c2000 | PHZ_c2846 | PHZ_c2000 | PHZ_c2846 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aldehyde dehydrogenase. | 0.929 |
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