STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2020acyl-CoA dehydrogenase family protein. (392 aa)    
Predicted Functional Partners:
PHZ_c2540
acyl-CoA dehydrogenase.
 
     0.968
PHZ_c2498
acyl-CoA dehydrogenase.
 
     0.967
PHZ_c2775
acyl-CoA dehydrogenase.
 
     0.952
PHZ_c2335
acyl-CoA dehydrogenase.
 
    
0.879
PHZ_c2679
acyl-CoA dehydrogenase family protein.
 
    
0.864
PHZ_c3217
Fatty oxidation complex, alpha subunit; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.825
PHZ_c2021
TonB-dependent receptor.
       0.773
PHZ_c2019
Transcriptional regulator.
  
    0.757
PHZ_c2118
Hypothetical protein.
 
     0.752
PHZ_c2018
Conserved hypothetical protein.
       0.630
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.