STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHZ_c2351Conserved hypothetical protein. (242 aa)    
Predicted Functional Partners:
virB6
Type IV secretory pathway, VirB6 component.
   
 
 0.913
PHZ_c2347
Conjugal transfer protein.
     
 0.822
virB4
Type IV secretory pathway, VirB4 component.
     
 0.811
virB3
Type IV secretory pathway, VirB3 component.
     
 0.808
virB2
Type IV secretory pathway, VirB2 components (pilins).
     
 0.806
PHZ_c2356
virB11 type IV secretion protein.
     
 0.456
virB8
Type IV secretory pathway, component VirB8.
     
 0.455
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.