Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHZ_c0890 | PHZ_c1713 | PHZ_c0890 | PHZ_c1713 | acyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase family protein. | 0.405 |
PHZ_c0890 | PHZ_c1748 | PHZ_c0890 | PHZ_c1748 | acyl-CoA dehydrogenase. | enoyl-CoA hydratase/carnithine racemase. | 0.938 |
PHZ_c0890 | PHZ_c2524 | PHZ_c0890 | PHZ_c2524 | acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.902 |
PHZ_c0890 | PHZ_c2544 | PHZ_c0890 | PHZ_c2544 | acyl-CoA dehydrogenase. | enoyl-CoA hydratase. | 0.405 |
PHZ_c0890 | PHZ_c3300 | PHZ_c0890 | PHZ_c3300 | acyl-CoA dehydrogenase. | enoyl-CoA hydratase/isomerase. | 0.938 |
PHZ_c0890 | hbd | PHZ_c0890 | PHZ_c3152 | acyl-CoA dehydrogenase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.555 |
PHZ_c1574 | PHZ_c1713 | PHZ_c1574 | PHZ_c1713 | acetyl-CoA acetyltransferase. | enoyl-CoA hydratase/isomerase family protein. | 0.625 |
PHZ_c1574 | PHZ_c1748 | PHZ_c1574 | PHZ_c1748 | acetyl-CoA acetyltransferase. | enoyl-CoA hydratase/carnithine racemase. | 0.701 |
PHZ_c1574 | PHZ_c2544 | PHZ_c1574 | PHZ_c2544 | acetyl-CoA acetyltransferase. | enoyl-CoA hydratase. | 0.515 |
PHZ_c1574 | PHZ_c3300 | PHZ_c1574 | PHZ_c3300 | acetyl-CoA acetyltransferase. | enoyl-CoA hydratase/isomerase. | 0.956 |
PHZ_c1574 | hbd | PHZ_c1574 | PHZ_c3152 | acetyl-CoA acetyltransferase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.958 |
PHZ_c1713 | PHZ_c0890 | PHZ_c1713 | PHZ_c0890 | enoyl-CoA hydratase/isomerase family protein. | acyl-CoA dehydrogenase. | 0.405 |
PHZ_c1713 | PHZ_c1574 | PHZ_c1713 | PHZ_c1574 | enoyl-CoA hydratase/isomerase family protein. | acetyl-CoA acetyltransferase. | 0.625 |
PHZ_c1713 | PHZ_c1748 | PHZ_c1713 | PHZ_c1748 | enoyl-CoA hydratase/isomerase family protein. | enoyl-CoA hydratase/carnithine racemase. | 0.923 |
PHZ_c1713 | PHZ_c2406 | PHZ_c1713 | PHZ_c2406 | enoyl-CoA hydratase/isomerase family protein. | Isovaleryl CoA dehydrogenase. | 0.405 |
PHZ_c1713 | PHZ_c2524 | PHZ_c1713 | PHZ_c2524 | enoyl-CoA hydratase/isomerase family protein. | acyl-CoA dehydrogenase. | 0.405 |
PHZ_c1713 | PHZ_c2544 | PHZ_c1713 | PHZ_c2544 | enoyl-CoA hydratase/isomerase family protein. | enoyl-CoA hydratase. | 0.918 |
PHZ_c1713 | PHZ_c3300 | PHZ_c1713 | PHZ_c3300 | enoyl-CoA hydratase/isomerase family protein. | enoyl-CoA hydratase/isomerase. | 0.941 |
PHZ_c1713 | gcdH | PHZ_c1713 | PHZ_c0291 | enoyl-CoA hydratase/isomerase family protein. | glutaryl-CoA dehydrogenase. | 0.405 |
PHZ_c1713 | hbd | PHZ_c1713 | PHZ_c3152 | enoyl-CoA hydratase/isomerase family protein. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.959 |
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