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STRINGSTRING
MLOC_10348.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_10348.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_10348.1Uncharacterized protein (150 aa)    
Predicted Functional Partners:
MLOC_78807.1
DNA ligase (574 aa)
     
   
  0.754
MLOC_54787.1
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (233 aa)
           
  0.715
MLOC_14639.1
Uncharacterized protein (247 aa)
           
  0.715
MLOC_49689.2
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase (701 aa)
           
  0.706
MLOC_39661.2
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (189 aa)
           
  0.689
MLOC_59199.1
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family (161 aa)
     
      0.654
MLOC_10463.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (178 aa)
     
      0.654
MLOC_65501.3
Uncharacterized protein (805 aa)
       
  0.624
MLOC_55396.1
Predicted protein; Uncharacterized protein (406 aa)
   
   
  0.597
MLOC_79727.1
Serine/threonine-protein phosphatase (307 aa)
   
      0.575
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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