STRINGSTRING
CPD protein (Hordeum vulgare) - STRING interaction network
"CPD" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPDPredicted protein (498 aa)    
Predicted Functional Partners:
MLOC_21961.1
Predicted protein (98 aa)
         
  0.929
MLOC_11603.2
Uncharacterized protein (770 aa)
         
  0.924
MLOC_72591.1
Predicted protein (262 aa)
   
   
0.878
MLOC_61008.1
Predicted protein (476 aa)
   
   
 
0.874
MLOC_17178.1
Ent-kaurene oxidase 1 (408 aa)
   
   
  0.848
MLOC_62829.1
Predicted protein (491 aa)
   
   
0.842
MLOC_21266.1
Uncharacterized protein (267 aa)
   
   
  0.816
MLOC_69179.1
Predicted protein (419 aa)
     
  0.809
MLOC_81146.1
Uncharacterized protein (214 aa)
   
   
  0.802
MLOC_21688.1
Predicted protein (491 aa)
   
   
  0.792
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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