• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
MLOC_11172.2 protein (Hordeum vulgare) - STRING interaction network
"MLOC_11172.2" - Protein YIPF in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_11172.2Protein YIPF (290 aa)    
Predicted Functional Partners:
MLOC_13452.1
Protein YIPF (207 aa)
     
 
  0.963
MLOC_2346.1
Protein YIPF (87 aa)
     
 
  0.908
MLOC_57580.3
Predicted protein; Uncharacterized protein (359 aa)
           
  0.638
MLOC_50973.1
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking (186 aa)
     
 
  0.633
MLOC_51889.1
Uncharacterized protein; Belongs to the syntaxin family (238 aa)
     
 
  0.612
MLOC_34810.1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family (259 aa)
     
   
  0.591
MLOC_72429.1
Uncharacterized protein (817 aa)
           
  0.497
MLOC_60421.1
Predicted protein (78 aa)
           
  0.473
MLOC_5717.1
Uncharacterized protein (78 aa)
           
  0.473
MLOC_11544.2
Uncharacterized protein (321 aa)
           
  0.463
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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