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STRINGSTRING
MLOC_11971.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_11971.1" - Transcription elongation factor spt6 in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_11971.1Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1629 aa)    
Predicted Functional Partners:
MLOC_78275.1
Uncharacterized protein (359 aa)
     
  0.992
MLOC_28080.1
Uncharacterized protein (80 aa)
     
  0.987
MLOC_16577.1
Uncharacterized protein (372 aa)
     
  0.984
MLOC_12806.1
Uncharacterized protein (866 aa)
     
  0.983
MLOC_81023.1
Uncharacterized protein (1028 aa)
     
  0.981
MLOC_51216.2
Uncharacterized protein (1049 aa)
     
  0.981
MLOC_19368.7
Transcription elongation factor SPT5 (904 aa)
     
  0.981
MLOC_12127.1
Uncharacterized protein (372 aa)
     
  0.981
MLOC_80063.2
Uncharacterized protein (1116 aa)
     
 
  0.966
MLOC_19401.1
Uncharacterized protein (1849 aa)
     
 
  0.966
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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