STRINGSTRING
MLOC_12172.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_12172.1" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_12172.1Predicted protein (213 aa)    
Predicted Functional Partners:
MLOC_7039.3
Uncharacterized protein (276 aa)
           
  0.497
MLOC_67590.1
Predicted protein (191 aa)
           
  0.497
MLOC_75304.1
Urishiol oxidase ; Lignin degradation and detoxification of lignin-derived products (581 aa)
           
  0.454
MLOC_58642.1
Predicted protein (332 aa)
           
  0.410
MLOC_54272.1
Predicted protein (332 aa)
           
  0.410
MLOC_38676.1
Predicted protein (137 aa)
   
          0.406
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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