STRINGSTRING
MLOC_12188.3 protein (Hordeum vulgare) - STRING interaction network
"MLOC_12188.3" - Predicted protein in Hordeum vulgare
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_12188.3Predicted protein (476 aa)    
Predicted Functional Partners:
MLOC_73249.1
Predicted protein (467 aa)
     
0.661
MLOC_6232.1
Uncharacterized protein (637 aa)
     
0.655
MLOC_55093.1
Predicted protein (835 aa)
     
0.654
MLOC_65690.1
Coatomer subunit gamma ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (896 aa)
     
  0.612
MLOC_19195.2
Coatomer subunit gamma ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (889 aa)
     
  0.612
MLOC_60310.1
Predicted protein (413 aa)
     
0.603
MLOC_72618.1
Uncharacterized protein (181 aa)
       
  0.602
arf1
ADP-ribosylation factor 1-like protein (181 aa)
       
  0.602
MLOC_6518.1
Predicted protein (181 aa)
       
  0.602
MLOC_63273.1
Uncharacterized protein (191 aa)
       
  0.602
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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