STRINGSTRING
MLOC_12375.7 protein (Hordeum vulgare) - STRING interaction network
"MLOC_12375.7" - Aconitate hydratase in Hordeum vulgare
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_12375.7Aconitate hydratase ; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (809 aa)    
Predicted Functional Partners:
MLOC_67077.3
Uncharacterized protein (384 aa)
   
  0.986
MLOC_66461.2
Uncharacterized protein (384 aa)
   
  0.986
MLOC_10622.1
Citrate synthase (507 aa)
 
  0.913
MLOC_66594.1
Citrate synthase (472 aa)
   
  0.893
MLOC_25246.1
Predicted protein (699 aa)
   
 
  0.866
MLOC_69600.1
Isocitrate dehydrogenase [NADP] (473 aa)
   
  0.846
MLOC_51254.1
Isocitrate dehydrogenase [NADP] (414 aa)
   
  0.846
MLOC_3886.1
Isocitrate dehydrogenase [NADP] (446 aa)
   
  0.846
MLOC_56785.1
Uncharacterized protein (196 aa)
   
  0.809
MLOC_43486.2
Predicted protein (371 aa)
   
  0.809
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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