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STRINGSTRING
MLOC_12513.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_12513.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_12513.1Uncharacterized protein (573 aa)    
Predicted Functional Partners:
MLOC_65855.1
Uncharacterized protein (513 aa)
     
 
    0.971
MLOC_70474.2
Uncharacterized protein (420 aa)
     
   
  0.740
MLOC_4350.2
Uncharacterized protein (825 aa)
     
 
    0.693
MLOC_12182.1
Uncharacterized protein (237 aa)
     
 
    0.693
MLOC_71779.3
Uncharacterized protein (692 aa)
     
 
    0.693
MLOC_71240.1
Uncharacterized protein (693 aa)
     
 
    0.693
MLOC_68939.1
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family (264 aa)
     
   
  0.680
MLOC_15664.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (670 aa)
     
        0.659
MLOC_37060.1
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1024 aa)
     
        0.639
MLOC_72643.1
Uncharacterized protein; Belongs to the DEAD box helicase family (238 aa)
     
   
  0.579
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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