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STRINGSTRING
MLOC_12540.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_12540.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_12540.1Uncharacterized protein (79 aa)    
Predicted Functional Partners:
MLOC_42821.1
Predicted protein (451 aa)
     
  0.874
MLOC_64906.1
Histone H2A (139 aa)
     
  0.863
MLOC_60235.1
Histone H2A (137 aa)
     
  0.863
MLOC_12053.1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family (309 aa)
     
  0.848
MLOC_26628.1
RuvB-like helicase (384 aa)
     
  0.845
MLOC_44900.1
Uncharacterized protein (53 aa)
     
  0.844
MLOC_61131.1
Uncharacterized protein (139 aa)
     
  0.841
MLOC_8589.1
Histone H4 (69 aa)
     
  0.838
MLOC_71034.1
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (88 aa)
     
  0.838
MLOC_34952.2
Histone H4 (47 aa)
     
  0.838
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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