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STRINGSTRING
MLOC_12686.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_12686.1" - Auxin efflux carrier component in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_12686.1Auxin efflux carrier component; May act as a component of the auxin efflux carrier (680 aa)    
Predicted Functional Partners:
MLOC_71203.1
Uncharacterized protein (328 aa)
       
 
  0.891
MLOC_18109.1
Uncharacterized protein (252 aa)
       
 
  0.891
MLOC_63760.1
Uncharacterized protein (712 aa)
       
 
  0.748
MLOC_55345.6
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (957 aa)
     
   
  0.732
MLOC_54960.4
Predicted protein (563 aa)
           
  0.704
MLOC_65286.1
Uncharacterized protein (366 aa)
           
  0.686
MLOC_55474.1
Uncharacterized protein (297 aa)
           
  0.665
MLOC_12820.1
Uncharacterized protein (430 aa)
       
      0.657
MLOC_69619.4
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (609 aa)
       
      0.651
MLOC_81185.2
Uncharacterized protein (550 aa)
     
   
  0.640
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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