STRINGSTRING
MLOC_12822.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_12822.1" - Photosystem II reaction center psb28 protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_12822.1Photosystem II reaction center psb28 protein (165 aa)    
Predicted Functional Partners:
psbB
Uncharacterized protein (206 aa)
   
 
 
  0.825
MLOC_20714.1
Uncharacterized protein (85 aa)
   
 
 
  0.822
MLOC_62485.1
Uncharacterized protein (276 aa)
 
        0.641
MLOC_15227.2
Uncharacterized protein (392 aa)
   
        0.617
MLOC_53079.4
Predicted protein (265 aa)
   
   
  0.611
MLOC_65067.1
Predicted protein (286 aa)
   
        0.593
MLOC_66074.2
Predicted protein (235 aa)
   
   
  0.592
MLOC_53370.3
Predicted protein (287 aa)
   
        0.590
MLOC_72875.1
Predicted protein (184 aa)
   
        0.586
MLOC_56102.3
Predicted protein (145 aa)
   
        0.583
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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