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STRINGSTRING
MLOC_12859.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_12859.1" - Pectinesterase in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_12859.1Pectinesterase (562 aa)    
Predicted Functional Partners:
MLOC_18360.1
Pectate lyase (378 aa)
 
   
  0.970
MLOC_6904.2
Pectate lyase (405 aa)
 
 
  0.914
MLOC_60251.1
Pectate lyase (158 aa)
       
  0.873
MLOC_59629.3
Pectate lyase (163 aa)
       
  0.838
MLOC_22135.1
Uncharacterized protein (415 aa)
 
   
  0.837
MLOC_6444.1
Uncharacterized protein (409 aa)
 
   
  0.837
MLOC_67885.6
Predicted protein (400 aa)
 
   
  0.792
MLOC_12660.1
Uncharacterized protein (230 aa)
 
   
  0.785
MLOC_60466.2
Uncharacterized protein (224 aa)
 
   
    0.783
MLOC_67352.1
Pectate lyase (140 aa)
       
  0.756
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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