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STRINGSTRING
MLOC_13187.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_13187.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_13187.1Uncharacterized protein (616 aa)    
Predicted Functional Partners:
MLOC_12901.2
Uncharacterized protein; Belongs to the DEAD box helicase family (653 aa)
   
 
0.978
MLOC_544.3
Uncharacterized protein (415 aa)
       
    0.973
MLOC_27932.1
Uncharacterized protein (365 aa)
     
 
  0.912
MLOC_56244.1
Uncharacterized protein (633 aa)
   
0.909
MLOC_58105.1
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (976 aa)
     
   
  0.877
MLOC_61417.2
Uncharacterized protein (721 aa)
     
  0.858
MLOC_45674.1
Predicted protein; Belongs to the universal ribosomal protein uL3 family (264 aa)
     
  0.844
MLOC_71553.1
Uncharacterized protein (170 aa)
     
  0.831
MLOC_67808.1
RNA helicase (643 aa)
   
0.827
MLOC_70449.2
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (595 aa)
     
  0.827
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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