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STRINGSTRING
MLOC_13192.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_13192.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_13192.1Uncharacterized protein (139 aa)    
Predicted Functional Partners:
MLOC_14744.1
Uncharacterized protein (475 aa)
     
 
  0.935
MLOC_58976.1
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (696 aa)
     
  0.912
MLOC_37545.1
Uncharacterized protein (1001 aa)
 
     
  0.912
MLOC_10482.5
Uncharacterized protein (1822 aa)
     
   
  0.912
MLOC_52352.2
Uncharacterized protein (682 aa)
     
 
  0.904
MLOC_40067.1
Uncharacterized protein (111 aa)
     
 
  0.904
MLOC_70449.2
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (595 aa)
     
  0.898
MLOC_68535.2
Uncharacterized protein (234 aa)
     
  0.896
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis (245 aa)
     
  0.890
MLOC_15664.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (670 aa)
     
   
  0.884
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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