• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
MLOC_13385.11 protein (Hordeum vulgare) - STRING interaction network
"MLOC_13385.11" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_13385.11Predicted protein (418 aa)    
Predicted Functional Partners:
MLOC_38939.1
Uncharacterized protein (252 aa)
     
  0.999
MLOC_80715.2
Uncharacterized protein (1594 aa)
     
  0.937
MLOC_78794.4
Uncharacterized protein (249 aa)
     
  0.937
MLOC_53310.1
Uncharacterized protein (562 aa)
     
  0.937
MLOC_16762.1
Uncharacterized protein (103 aa)
     
  0.937
MLOC_13212.2
Uncharacterized protein (186 aa)
     
  0.937
MLOC_37060.1
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1024 aa)
     
   
  0.883
MLOC_61799.1
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit; Belongs to the WD repeat TRM82 family (432 aa)
     
   
  0.852
MLOC_31285.1
Uncharacterized protein (71 aa)
   
  0.844
MLOC_34430.1
Uncharacterized protein (410 aa)
     
   
  0.837
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
Server load: low (8%) [HD]